黄建勋，男, 博士，1981年10月生,台湾台北市人。现任复旦副研究员，骏马计划高层次人才，兼职内蒙古大学研究员，硕士生/博士生导师，。
主要从事被子植物系统发育方面的研究。先后承担完成了重大研究计划、面上项目等5余项；在国内外核心刊物上发表学术论文31余篇，其中SCI刊物上发表31余篇;出版专著1部。
在被子植物进化方面取得了突出成绩，主要包括以下几个方面：
（1）被子植物生物多样性发生历史和维持机制: 被子植物进化的过程，是制订生物多样性精准保护策略，以及种质资源高效和可持续利用的重要基础。课题组解析被子植物中重要资源植物科的亲缘关系，例如：十字花科、蔷薇科、菊科、豆科、葫芦科等。并基此探讨关键全基因组重复事件与古地理气候变化协同促进物种分化的机制，和各科形态和生理性状创新促进生物多样性的过程。
（2）探讨基因组层面的物种形成与适应性进化: 物种形成与适应性进化是进化生物学的核心理念，是物种多样性分布的重要基础。课题组从基因组层面，深入解析物种分化与优势表型的进化机制，例如探讨葫芦科古多倍体在杂交后面临的基因组冲突、二倍化、亚基因组非对称进化、同源基因差异表达等对其优势性状形成的影响。
联系方式
E-mail: chhuamg1981@139.com
学历
l2000.08-2004.07, 台湾大学, 生命科学专业，本科
l2004.08-2012.03, 台湾大学, 植物学专业, 博士
l2013.06-2016.06，复旦大学，生命科学学院，博士后
l2016.07-2018.11，复旦大学，生命科学学院，青年副研究员
l2018.12- ，复旦大学，生命科学学院，副研究员，硕博导
l2020.7-2020.12, 美国宾州大学，生命科学院，访问学者
l2023.6- ,内蒙古大学，兼职研究员，硕博导
近十年主持或承担的科研项目
l2016.01-2018.12:国家自然科学基金委员会，重大研究计划，91531301，十字花科植物近缘种环境适应性的系统发育基因组学和分子遗传学研究，主要参与
l2017.01-2020.12:国家自然科学基金委员会，面上项目，31670209，基于核基因的蔷薇科系统重建及相关进化生物学研究，主要参与
l2018.01-2019.12:国家自然科学基金委员会，面上项目，31770242，建构高涵盖度的十字花科系统进化关系并分析花果发育及抗逆基因在不同支系中的进化路线，主持
l2020.01-2023.12:国家自然科学基金委员会，面上项目，31970224，基于核基因的葫芦科系统关系重建和相关进化生物学研究，主持
l2023.01-2026.12:国家自然科学基金委员会，面上项目，32270232，茄科系统重建和进化生物学分析揭示其花果发育进化机理，主持
社会兼职
l内蒙古大学，研究员，硕士生/博士生导师 (2023年~)
获奖情况
l2014年博士后国际交流计划引进项目
l2016年复星奖教金杰出奖
l2019年全国高校生命科学类微课教学比赛二等奖
参加编写的主要论著：
Li H, Huang CH, Ma H. 2019. Whole-genome duplications in pear and apple. In: Korban S. (eds). The Pear Genome. Compendium of Plant Genomes. Springer, Cham.
近十年发表主要学术论文
1. Zhang L, Morales-Briones DF, Li Y, Zhang G, Zhang T, Huang C-H, Guo P, Zhang K, Wang Y*, Wang H*, Shang F-D*, Ma H* 2023. Phylogenomics insights into gene evolution, rapid species diversification, and morphological innovation of the apple tribe (Maleae, Rosaceae). New Phytologist https://doi.org/10.1111/nph.19175.
2. Yu Y, Song W, Zhai N, Zhang S, Wang J, Wang S, Liu W, Huang C-H, Ma H, Chai J, Chang F* 2023. PXL1 and SERKs act as receptor–coreceptor complexes for the CLE19 peptide to regulate pollen development. Nature Communications 14: 3307.
3. Hu R, Li X, Hu Y, Zhang R, Lv Q, Zhang M, Sheng X, Zhao F, Chen Z, Ding Y, Yuan H, Wu X, Xing S, Yan X, Bao F, Wan P, Xiao L, Wang X, Xiao W, Decker EL, van Gessel N, Renault H, Wiedemann G, Horst NA, Haas FB, Wilhelmsson PKI, Ullrich KK, Neumann E, Lv B, Liang C, Du H, Lu H, Gao Q, Cheng Z, You H, Xin P, Chu J, Huang C-H, Liu Y, Dong S, Zhang L, Chen F, Deng L, Duan F, Zhao W, Li K, Li Z, Li X, Cui H, Zhang YE, Ma C, Zhu R, Jia Y, Wang M, Hasebe M, Fu J, Goffinet B, Ma H, Rensing SA, Reski R*, He Y* 2023. Adaptive evolution of the enigmatic Takakia now facing climate change in Tibet. Cell 186: 3558-3576.e3517.
4. Huang J, Xu W, Zhai J, Hu Y, Guo J, Zhang C, Zhao Y, Zhang L, Martine C, Ma H*, Huang C-H* 2023. Nuclear phylogeny and insights into whole-genome duplications and reproductive development of Solanaceae plants. Plant Communications 4: 100595.
5. Zan T, He Y-T, Zhang M, Yonezawa T, Ma H, Zhao Q-M, Kuo W-Y, Zhang W-J*, Huang C-H* 2023. Phylogenomic analyses of Camellia support reticulate evolution among major clades. Molecular Phylogenetics and Evolution 182: 107744.
6. Wang B, Luo Q, Li Y, Du K, Wu Z, Li T, Shen W-H, Huang C-H*, Gan J*, Dong A* 2022. Structural insights into partner selection for MYB and bHLH transcription factor complexes. Nature Plants https://doi: 10.1038/s41477-41022-01223-w.
7. Chen L-Y, Lu B, Morales-Briones DF, Moody ML, Liu F, Hu G-W, Huang C-H*, Chen J-M*, Wang Q-F* 2022. Phylogenomic analyses of Alismatales shed light into adaptations to aquatic environments. Molecular Biology and Evolution 39: msac079.
8. Liu B-B, Ren C, Kwak M, Hodel RGJ, Xu C, He J, Zhou W-B, Huang C-H, Ma H, Qian G-Z, Hong D-Y*, Wen J* 2022. Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere. Journal of Integrative Plant Biology 64: 1020-1043.
9. Huang W, Zhang L, Columbus JT, Hu Y, Zhao Y, Tang L, Guo Z, Chen W, McKain M, Bartlett M, Huang C-H, Li D-Z, Ge S, Ma H*. 2022. A well-supported nuclear phylogeny of Poaceae and implications for the evolution of C4 photosynthesis. Molecular Plant 15: 755-777.
10. Zhang L, Zhu X, Zhao Y, Guo J, Zhang T, Huang W, Huang J, Hu Y, Huang C-H*, Ma H*. 2022. Phylotranscriptomics resolves the phylogeny of Pooideae and uncovers factors for their adaptive evolution. Molecular Biology and Evolution 39: msac026.
11. Morales-Briones DF*, Gehrke B, Huang C-H, Liston A, Ma H, Marx HE, Tank DC, Yang Y. 2021. Analysis of paralogs in target enrichment data pinpoints multiple ancient polyploidy events in Alchemilla s.l. (Rosaceae). Systematic Biology 71: 190-207.
12. Hu S-H, Lin S-F, Huang Y-C, Huang C-H, Kuo W-Y, Jinn T-L*. 2021. Significance of AtMTM1 and AtMTM2 for mitochondrial MnSOD activation in Arabidopsis. Frontiers in Plant Science 12: 690064.
13. Zhao Y, Zhang R, Jiang K, Qi J, Hu Y, Guo J, Zhu R, Zhang T, Egan AN, Yi T-S, Huang CH*, Ma H*. 2021. Nuclear phylotranscriptomics and phylogenomics support numerous polyploidization events and hypotheses for the evolution of rhizobial nitrogen-fixing symbiosis in Fabaceae. Molecular Plant 14: 748-773.
14. Zhang C#, Huang CH#, Liu M, Hu Y, Panero JL, Luebert F, Gao T, Ma H*. 2021. Phylotranscriptomic insight into Asteraceae diversity, polyploidy, and morphological innovation. Journal of Integrative Plant Biology 63: 1273-1293.
15. Guo J, Xu W, Hu Y, Huang J, Zhao Y, Zhang L, Huang CH*, Ma H*. 2020. Phylotranscriptomics in Cucurbitaceae reveal multiple whole-genome duplications and key morphological and molecular innovations. Molecular Plant 13: 1117-1133.
16. Huang CH*, Qi X, Chen D, Qi J, Ma H*. 2020. Recurrent genome duplication events likely contributed to both the ancient and recent rise of ferns. Journal of Integrative Plant Biology 62: 433-455.
17. Yang L, Su D, Chang X, Foster CSP, Sun L, Huang CH, Zhou X, Zeng L, Ma H, Zhong B*. 2020. Phylogenomic insights into deep phylogeny of angiosperms based on broad nuclear gene sampling. Plant Communications 1: 100027.
18. Zhang C, Zhang T, Luebert F, Xiang Y, Huang CH, Hu Y, Rees M, Frohlich MW, Qi J*, Weigend M*, Ma H*. 2020. Asterid phylogenomics/phylotranscriptomics uncover morphological evolutionary histories and support phylogenetic placement for numerous whole-genome duplications. Molecular Biology and Evolution 37: 3188-3210.
19. Qi X, Kuo L-Y, Guo C, Li H, Li Z, Qi J, Wang L, Hu Y, Xiang J, Zhang C, Guo J, Huang CH* and Ma H*. 2018. A well-resolved fern nuclear phylogeny reveals the evolution history of numerous transcription factor families. Molecular Phylogenetics and Evolution 127: 961-977.
20. Xiang YZ#, Huang CH#, Yi H, Wen J, Li S, Yi T, Chen H, Xiang J*, and Hong M*. 2017. Evolution of Rosaceae fruit types based on nuclear phylogeny in the context of geological times and genome duplication. Molecular Biology and Evolution 34:
21. Huang CH, Zhang C, Liu M, Hu Y, Gao T, Qi J*, and Ma H*. 2016. Multiple polyploidization events across Asteraceae with two nested events in the early history revealed by nuclear phylogenomics. Molecular Biology and Evolution 33: 2820-2835.
22. Huang CH, Sun R, Hu Y, Zeng L, Zhang N, Cai L, Zhang Q, Koch MA, Al-Shehbaz I, Edger PP, Pires JC, Tan DY, Zhong Y, and Ma H*. 2016. Resolution of Brassicaceae phylogeny using nuclear genes uncovers nested radiations and supports convergent morphological evolution. Molecular Biology and Evolution 33: 394-412.
